BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002D04LP1|AL424950
(996 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig863 1806 0.0
>3x_Contig863
Length = 2811
Score = 1806 bits (910), Expect = 0.0
Identities = 971/984 (98%), Gaps = 7/984 (0%)
Strand = Plus / Plus
Query: 1 gaacacgaatgggtcgataagttgaacgatgacgaaaagaagttgatcgccaagtgcttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1045 gaacacgaatgggtcgataagttgaacgatgacgaaaagaagttgatcgccaagtgcttg 1104
Query: 61 ccaatcttagaaaagaacatcaagaagggtctagctttctcgaagcaaaccaagttgtaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1105 ccaatcttagaaaagaacatcaagaagggtctagctttctcgaagcaaaccaagttgtaa 1164
Query: 121 gtgtaaggggtgtgcacaaacaacctacacttcaagtctttatatccatatagtaggtaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1165 gtgtaaggggtgtgcacaaacaacctacacttcaagtctttatatccatatagtaggtaa 1224
Query: 181 gttaagtaacaccactctataggcaatgaatgcttatgctatgcaaatttgaataatcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1225 gttaagtaacaccactctataggcaatgaatgcttatgctatgcaaatttgaataatcta 1284
Query: 241 gattcgacctggctagaaacctacgttttactcaccggatgactttgcgcctgattgcgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1285 gattcgacctggctagaaacctacgttttactcaccggatgactttgcgcctgattgcgt 1344
Query: 301 ca-ctggccgggtaacagagggacattggacattctcccccatatctccagctttttttt 359
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1345 cagctggccgggtaacagagggacattggacattctcccccatatctccagctttttttt 1404
Query: 360 tcatttcttaagaaccttaatgcacagagtggaaagcgattacgagaagcaagcagcaca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1405 tcatttcttaagaaccttaatgcacagagtggaaagcgattacgagaagcaagcagcaca 1464
Query: 420 aaccacagttgacatattacttgcacgacatttgtgtctgataaatgaatttacagtagt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1465 aaccacagttgacatattacttgcacgacatttgtgtctgataaatgaatttacagtagt 1524
Query: 480 gatgaaaaatttgtgtaaataattcacgcgtatataacaccagaggttgataaactccat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1525 gatgaaaaatttgtgtaaataattcacgcgtatataacaccagaggttgataaactccat 1584
Query: 540 cgtttagatgacttcaccaagaacgagaaaagccataccccgaccagtcgtaaccaccag 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1585 cgtttagatgacttcaccaagaacgagaaaagccataccccgaccagtcgtaaccaccag 1644
Query: 600 caatacagacgaaagatgttcaaaaagattagagataagattcatccaacatacaatcct 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1645 caatacagacgaaagatgttcaaaaagattagagataagattcatccaacatacaatcct 1704
Query: 660 gagggcatcacgtggaccagacgcaagt-tgtcmcanangtgggtagccgaagtaccagt 718
|||||||||||||||||||||||||||| || || | || ||||||||||||||||||
Sbjct: 1705 gagggcatcacgtggaccagacgcaagtctggtccacaagt-ggtagccgaagtaccagt 1763
Query: 719 tgttgtcgacaagaaaactggacagaacggcaaggccaagagcaagagcaaggataaagc 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1764 tgttgtcgacaagaaaactggacagaacggcaaggccaagagcaagagcaaggataaagc 1823
Query: 779 tgccggtgcactaccttgtcatgacagatacacagaagagctcgatgtcgagctcgttgt 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1824 tgccggtgcactaccttgtcatgacagatacacagaagagctcgatgtcgagctcgttgt 1883
Query: 839 g-aacagctcagtttggaagacgaactgaaattggtacatgatgtagcgatggaatccat 897
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1884 gaaacagctcagtttggaagacgaactgaaattggtacatgatgtagcgatggaatccat 1943
Query: 898 cgttgcgtctgacatttcatcaccgtcgtcttcatcgacaacaacggctt-ctctgac-a 955
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 1944 cgttgcgtctgacatttcatcaccgtcgtcttcatcgacaacaacggcttcctctgacaa 2003
Query: 956 aaatgct-aacacgtkacatccaa 978
||||||| ||||||| ||||||||
Sbjct: 2004 aaatgctaaacacgtgacatccaa 2027
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6632
Number of Sequences: 1807
Number of extensions: 6632
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 996
length of database: 10,358,551
effective HSP length: 16
effective length of query: 980
effective length of database: 10,329,639
effective search space: 10123046220
effective search space used: 10123046220
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)